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SRX8583281: GSM4627262: RPMI_51500; Klebsiella variicola; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2500) run: 11.7M spots, 2.3G bases, 1Gb downloads

Submitted by: NCBI (GEO)
Study: Bioplatforms Australia: Antibiotic Resistant Sepsis Pathogens Framework Initiative - Klebsiella variicola 03-311-0071
PRJNA640635 • SRP268016 • All experiments • All runs
show Abstracthide Abstract
The Antibiotic Resistant Sepsis Pathogens Framework Initiative aims to develop a framework dataset of 5 sepsis pathogens (5 strains each) using an integrated application of genomic, transcriptomic, metabolomic and proteomic technologies. The pathogens included in this initiative are: Escherichia coli, Klebsiella pneumoniae complex, Staphylococcus aureus, Streptococcus pyogenes, and Streptococcus pneumoniae. This submission pertains to strain 03-311-0071. Overall design: 12 samples, 2 conditions, 6 biological replicates per condition. contributor: Bioplatforms Australia Antibiotic Resistant Sepsis Pathogens Framework Initiative
Sample: RPMI_51500
SAMN15326294 • SRS6874898 • All experiments • All runs
Organism: Klebsiella variicola
Library:
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: Bacterial rRNA depletion with Illumina Ribo-Zero rRNA Removal Kit (Bacteria) followed by strand RNAseq sample preparation with Illumina TruSeq Stranded mRNA Library Prep Kit
Experiment attributes:
GEO Accession: GSM4627262
Links:
Runs: 1 run, 11.7M spots, 2.3G bases, 1Gb
Run# of Spots# of BasesSizePublished
SRR1205486211,734,9722.3G1Gb2021-07-01

ID:
11158700

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